Table 2. Assembly statistics of 16S rRNA amplicon sequencing
Group | Sample ID | Total bases (bp) | The number of total reads | GC (%) | Q201) (%) | Q30 (%) |
Control | L22-188 | 44,776,760 | 148,760 | 53.9 | 91.2 | 82.3 |
L22-193 | 44,127,804 | 146,604 | 53.4 | 91.8 | 83.0 |
L22-199 | 44,124,794 | 146,594 | 54.0 | 91.2 | 82.2 |
L22-200 | 41,687,898 | 138,498 | 53.8 | 89.1 | 79.3 |
L22-201 | 48,285,216 | 160,416 | 54.0 | 91.0 | 81.9 |
L22-207 | 46,370,856 | 154,056 | 53.5 | 91.6 | 82.7 |
L22-208 | 43,538,446 | 144,646 | 54.0 | 91.7 | 82.9 |
SQE | L22-186 | 42,644,476 | 141,676 | 53.9 | 91.5 | 82.6 |
L22-190 | 43,236,242 | 143,642 | 53.8 | 91.5 | 82.8 |
L22-192 | 47,592,314 | 158,114 | 53.8 | 91.5 | 82.7 |
L22-198 | 35,927,962 | 119,362 | 54.2 | 90.0 | 80.2 |
L22-202 | 41,680,674 | 138,474 | 53.6 | 89.7 | 80.2 |
L22-209 | 40,436,340 | 134,340 | 53.5 | 92.3 | 83.9 |
L22-226 | 40,438,748 | 134,348 | 54.0 | 91.9 | 83.2 |
Q20 (%): The ratio of bases with Phred quality score of 20 or higher; Q30 (%): The ratio of bases with Phred quality score of 30 or higher.
bp, base pair; G,C guanine cytosine; SQE, Sasa quelpaertensis Nakai extract.