Table 3. Significant gene ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways associated with productive traits of Landrace pigs (p < 0.05)

Gene ontology and KEGG pathway	nGenes	p-value	Gene
GO:0051017-actin filament bundle assembly	2	0.02	CORO1B, RHOD
GO:1902476-chloride transmembrane transport	3	0.03	ANO1, ANO9, CLCN1
GO:0006303-double-strand break repair via nonhomologous end joining	3	0.01	KDM2A, NHEJ1, PRPF19
GO:0005886-plasma membrane	7	0.02	CDH20, CORO1B, PIGN, PTPRCAP, RHOD, SPTBN2, SYT12
GO:0035861-site of double-strand break	3	0.03	DDB1, NHEJ1, PRPF19
GO:0000785-chromatin	5	0.04	RAD51AP1, CDCA5, CCND2, DPF2, MEN1
GO:0008076-voltage-gated potassium channel complex	3	0.04	CTTN, KCNA1, KCNA6
GO:0004190-aspartic-type endopeptidase activity	6	0.00	PGA5, pregnancy-associated glycoprotein 2-like, PPAG3, PIP
GO:0005247-voltage-gated chloride channel activity	2	0.04	CLCN1, CLCN3
GO:0005509-calcium ion binding	9	0.04	EHD1, IHH, NAALADL1, CDH20, CABP4, CAPN1, LTBP3, SYT12, VWCE
ssc05012: Parkinson disease	6	0.03	COX8H, NDUFV1, NDUFA9, PSMD13, PRKACB, UBE2L6
ssc00982: Drug metabolism - cytochrome P450	3	0.04	GSTK1
ssc04340: Hedgehog signaling pathway	3	0.04	IHH, CCND2, PRKACB
ssc00480: Glutathione metabolism	2	0.04	glutathione S-transferase P-like
ssc00980: Metabolism of xenobiotics by cytochrome P450	2	0.04	glutathione S-transferase P-like
ssc05204: Chemical carcinogenesis - DNA adducts	2	0.04	glutathione S-transferase P-like