Table 2. Significance regions and candidate genes for productive traits

Traits SSC Position (Mb) gVar (%)1) nSNP Candidate genes
AGE (days) 1 159.24–159.88 2.05 9 RELCH, PIGN, RNF152, CDH20
ADG (g) 1 159.24–159.88 2.22 9 RELCH, PIGN, RNF152, CDH20
2 4.97–5.71 1.01 10 NDUFV1, CABP4, CORO1B, PTPRCAP
BF (mm) 2 2.46–3.26 2.34 15 ACTE1, SHANK2, CTTN, ANO1
0.07–0.42 1.46 5 PSMD13, COX8H
6.64–7.42 1.25 24 MAP3K11
5 65.61–66.36 1.68 18 NDUFA9, AKAP3, DYRK4, RAD51AP1,FGF6, C12orf4, TIGAR
14 19.67–20.42 1.27 10 AADAT, MFAP3L, CLCN3, NEK1, SH3RF1
18 6.88–7.67 1.27 28 ZYX, FAM131B
EMA (cm2) 2 13.04–13.46 2.07 21 CTNND1, BTBD18, TMX2, MED19, SERPING1
10.19–10.99 1.26 23 DDB1, VWCE, PPAG3
6 129.64–130.41 1.62 21 TTLL7, ADGRL2
102.18–102.96 1.24 13 AKAIN1, DLGAP1
7 109.35–110.14 1.42 24 ENSSSCG00000052115, ENSSSCG00000037928
14 26.65–27.30 1.34 13 TMEM132C, ENSSSCG00000042937
15 121.01–121.81 1.01 15 CRYBA2, CFAP65, IHH
Represents the proportion of genetic variance explained by 0.8 Mb.
SSC, Sus scrofa chromosome; nSNP, number of SNP in region; AGE, days to 105 kg; ADG, average daily gain; BF, backfat thickness; EMA, eye muscle area.