Table 2. Longitudinal shifts of major genera1) from day 0 to day 28
Genus | Group2) | Day | SEM | p-values |
0 | 1 | 4 | 7 | 10 | 14 | 17 | 21 | 24 | 28 | Linear | Quadratic |
Prevotella | Control | 19.757 | 17.552 | 20.935 | 19.746 | 23.073 | 18.702 | 18.706 | 19.472 | 22.539 | 19.090 | 0.439 | 0.6334 | 0.6876 |
Cannulation | 7.490 | 6.465 | 16.393 | 14.352 | 20.238 | 13.750 | 12.239 | 14.224 | 21.518 | 14.496 | 0.798 | 0.0022 | 0.0005 |
Fibrobacter | Control | 0.425 | 0.686 | 0.868 | 0.767 | 1.069 | 1.950 | 0.173 | 0.993 | 1.501 | 0.684 | 0.136 | 0.3626 | 0.3225 |
Cannulation | 0.316 | 0.034 | 0.727 | 1.244 | 0.759 | 1.232 | 0.151 | 1.021 | 0.402 | 0.170 | 0.125 | 0.9056 | 0.0813 |
Saccharofermentans | Control | 0.822 | 1.153 | 0.675 | 1.172 | 0.950 | 1.024 | 0.897 | 0.770 | 0.829 | 0.960 | 0.056 | 0.6370 | 0.8802 |
Cannulation | 2.378 | 3.282 | 1.048 | 1.450 | 1.134 | 0.667 | 1.159 | 0.817 | 1.229 | 0.855 | 0.153 | 0.0003 | <.0001 |
Butyrivibrio | Control | 0.587 | 0.834 | 0.810 | 1.414 | 0.901 | 1.391 | 1.146 | 1.178 | 0.736 | 1.735 | 0.077 | 0.0115 | 0.0378 |
Cannulation | 0.581 | 0.651 | 1.864 | 2.334 | 1.003 | 1.858 | 1.940 | 1.767 | 0.482 | 2.125 | 0.149 | 0.2073 | 0.1418 |
Pseudobutyrivibrio | Control | 0.468 | 0.552 | 0.575 | 1.003 | 0.905 | 0.912 | 0.607 | 1.039 | 1.231 | 0.287 | 0.070 | 0.3684 | 0.0300 |
Cannulation | 0.217 | 0.180 | 0.455 | 0.509 | 0.489 | 0.450 | 0.771 | 0.972 | 0.322 | 0.120 | 0.057 | 0.3667 | 0.0023 |
Ruminococcus | Control | 1.108 | 0.542 | 0.790 | 1.300 | 1.043 | 0.985 | 1.001 | 0.915 | 0.702 | 1.195 | 0.059 | 0.6085 | 0.8110 |
Cannulation | 0.505 | 0.676 | 2.508 | 1.420 | 1.528 | 0.626 | 1.255 | 1.318 | 1.504 | 1.122 | 0.127 | 0.7259 | 0.5700 |
Succiniclasticum | Control | 3.716 | 4.384 | 2.827 | 3.336 | 4.216 | 2.991 | 3.521 | 2.808 | 3.314 | 3.097 | 0.147 | 0.0948 | 0.2345 |
Cannulation | 2.286 | 3.126 | 2.070 | 2.479 | 3.475 | 2.487 | 3.399 | 3.008 | 1.577 | 4.206 | 0.167 | 0.1871 | 0.3754 |
Selenomonas | Control | 0.625 | 0.379 | 0.718 | 0.850 | 0.835 | 0.753 | 0.724 | 0.762 | 1.006 | 1.238 | 0.055 | 0.0011 | 0.0045 |
Cannulation | 0.035 | 0.022 | 0.348 | 0.030 | 0.157 | 0.215 | 0.126 | 0.216 | 0.150 | 0.110 | 0.020 | 0.3464 | 0.1492 |
Ruminobacter | Control | 0.433 | 1.293 | 0.949 | 0.875 | 0.500 | 0.554 | 0.777 | 0.717 | 0.955 | 0.655 | 0.070 | 0.5825 | 0.7274 |
Cannulation | 0.347 | 0.221 | 1.318 | 1.208 | 0.753 | 1.154 | 0.365 | 0.449 | 0.039 | 0.095 | 0.142 | 0.1734 | 0.0635 |
Succinivibrio | Control | 0.652 | 0.442 | 0.830 | 0.882 | 0.446 | 0.635 | 1.035 | 0.610 | 0.388 | 1.007 | 0.067 | 0.5309 | 0.8220 |
Cannulation | 0.052 | 0.035 | 1.523 | 0.015 | 0.029 | 0.736 | 0.327 | 0.321 | 0.000 | 0.056 | 0.122 | 0.4723 | 0.4950 |
Treponema | Control | 0.832 | 2.110 | 1.043 | 0.908 | 1.163 | 1.217 | 0.642 | 1.865 | 2.190 | 1.558 | 0.118 | 0.1202 | 0.0840 |
Cannulation | 3.014 | 1.299 | 1.570 | 2.012 | 2.291 | 1.566 | 0.760 | 1.947 | 2.091 | 1.212 | 0.166 | 0.2129 | 0.4117 |
Major genera are taxa with a relative abundance of at least 0.5% of the total sequences.
Eight Hanwoo steers were divided into the control (n = 4) and cannulation (n = 4) groups.