Table 1. Primer information for the 19 candidate microsatellite (MS) markers
No | Marker | Chr | Dye | Primer (5’-3’) | Allele size range |
1 | ADL0259 | 9 | VIC | F | CTCATTGCAGAGGAAGTTCT | 107–129 |
R | GTAATGGAGGATGCTCAGGT |
2 | ADL0268 | 1 | FAM | F | CTCCACCCCTCTCAGAACTA | 105–117 |
R | CAACTTCCCATCTACCTACT |
3 | ADL0293 | 17 | NED | F | GTAATCTAGAAACCCCATCT | 105–119 |
R | ACATACCGCAGTCTTTGTTC |
4 | ADL0304 | 18 | NED | F | GGGGAGGAACTCTGGAAATG | 137–159 |
R | CCTCATGCTTCGTGCTTTTT |
5 | ADL0317 | 4 | FAM | F | AGTTGGTTTCAGCCATCCAT | 178–204 |
R | CCCAGAGCACACTGTCACTG |
6 | GCT0016 | 9 | PET | F | TCCAAGGTTCTCCAGTTC | 109–125 |
R | GGCATAAGGATAGCAACAG |
7 | LEI0074 | 26 | VIC | F | GACCTGGTCCTGACATGGGTG | 224–240 |
R | GTTTGCTGATTAGCCATCGCG |
8 | LEI0094 | 4 | VIC | F | GATCTCACCAGTATGAGCTGC | 254–280 |
R | TCTCACACTGTAACACAGTGC |
9 | LEI0141 | 2 | FAM | F | CGCATTTGATGCATAACACATG | 220–242 |
R | AAGGCAAACTCAGCTGGAACG |
10 | MCW0029 | 5 | PET | F | GTGGACACCCATTTGTACCCTATG | 139–189 |
R | CATGCAATTCAGGACCGTGCA |
11 | MCW0087 | 2 | FAM | F | ATTTCTGCAGCCAACTTGGAG | 267–283 |
R | CTCAGGCAGTTCTCAAGAACA |
12 | MCW0104 | 13 | NED | F | TAGCACAACTCAAGCTGTGAG | 189–225 |
R | AGACTTGCACAGCTGTGTACC |
13 | MCW0123 | 14 | FAM | F | CCACTAGAAAAGAACATCCTC | 79–89 |
R | GGCTGATGTAAGAAGGGATGA |
14 | MCW0145 | 1 | VIC | F | ACTTTATTCTCCAAATTTGGCT | 181–211 |
R | AAACACAATGGCAACGGAAAC |
15 | MCW0228 | 10 | PET | F | GATCTCTGCATTACAAGCATG | 221–239 |
R | TTGCTGACCTGCTCATGCAAG |
16 | MCW0264 | 2 | PET | F | CTTACTTTTCACGACAGAAGC | 224–240 |
R | AGACTGAGTCACACTCGTAAG |
17 | MCW0330 | 17 | NED | F | TGGACCTCATCAGTCTGACAG | 254–286 |
R | AATGTTCTCATAGAGTTCCTGC |
18 | ROS0013 | 5 | NED | F | TGCTGCTCCTGGRAAATTG | 220–242 |
R | GAAAAGCCATGGAGGAATCA |
19 | ROS0083 | 13 | VIC | F | CATTACAGCTCAGTGTTGGCA | 109–129 |
R | TTGCAAGTGCTCTCCCATC |
The bold markers are the selected 12 microsatellite markers for the population study.
Chr, chromosome number; Dye, fluorescent dye.