Table 1. Genetic parameters in three Korean native cattle breeds

Parameter Chikso Hanwoo Heugu
HO 0.30 0.30 0.28
HE 0.28 0.28 0.26
F −0.041 −0.045 −0.069
PI_HAT (IBS) 0.096 0.115 0.155
MAF 0.12 0.12 0.11
Number of breed specific SNPs 1,491 925 1,784
MAF
 Minimum 0.06 0.06 0.02
 Maximum 0.46 0.30 0.48
 Average 0.09 0.10 0.14
Ne 13 generations ago 94 88 57
MAF, minor allele frequency; SNP, single nucleotide polymorphism; Ne, effective population size.