Table 1. Alpha diversity statistics among the three groups (three periods of exposure to short-term heat stress) of Hanwoo steers (n = 4)
Domain | Sample group (n = 4) | Sampling type1) | No. of sequences2) | No. of OTUs | Chao1 | Shannon diversity index | PD_whole_tree |
Bacteria | 0 day | Subsampled reads | 40,000 | 4,441a | 16,647a | 6.602a | 210a |
3 day | Subsampled reads | 40,000 | 4,618a | 15,802a | 6.644a | 217a |
6 day | Subsampled reads | 40,000 | 4,198a | 14,289a | 6.270a | 199a |
Archaea | 0 day | Subsampled reads | 40,000 | 1,310a | 4,169a | 3.378a | 20a |
3 day | Subsampled reads | 40,000 | 1,285a | 3,773a | 3.426a | 21a |
6 day | Subsampled reads | 40,000 | 1,239a | 3,884a | 2.984a | 20a |
Means of the three groups were compared using ANOVA followed by Duncan’s test.
From each rumen sample, 40,000 sequences were randomly subsampled to normalize the number of OTUs.
Means with the same superscript letter within a column indicate non-significant differences (p > 0.05).
OTUs, operational taxonomy units; PD, phylogenetic diversity.