Table 1
List of some Long non-coding RNAs and their role in different tissues

SNType or FamilyTarget TissueRoleReference
1Heat shock RNA1 (HSR1)Various tissues• stimulates trimerization of heat-shock factor1 (HSF1)with eukaryotic translation elongationfactor 1A[91]
2Meiotic recombination hot spot1 locus (Mrhl)Located in nucleus• Regulate spermatogenesis[23]
3HongrES2Expressed specifically in the cauda-epididymis• The transcript mil-HongrES2 inhibitsexpression of an epididymis-specific protein CES7 and its cholesterol esterase activity;• its overexpression results in retarded spermcapacitation[70]
4Testis-specific X-linked (Tsx)Expressed in pachytenespermatocytes• regulatory role in germline meiotic division[1]
5Dmrt1-related gene (Dmr)Testis-specific• essential transcription factor that promotesspermatogonial development by up-regulatingSohlh1 (Spermatogenesis and Oogenesis Specific Basic Helix-Loop-Helix 1);• prevents premature meiosis in spermatogoniaby repressing Stra8 (Gene stimulated by retinoic acid 8)[76]
6Homeobox antisense intergenic RNA (HOTAIR)Gastric adenocarcinoma tissues, Lung, Breast, Kidney• Promotes cancer cell migration, invasion, and metastasis• Increased expression may affect genomic relocalization of the polycomb repressive complex 2;• Can enhance trimethylation of H3K27;• biomarker for poor prognosis in colorectal cancer[32, 48]
7Metastasis-associated lung adenocarcinoma transcript 1 (MALAT1)Lung, pancreas• Promotes cancer cell migration, invasion, and metastasis• Knockdown of MALAT1 (in HCC cell line) demonstrated amarked reduction in tumor progression. So it can be used as negative prognostic biomarker[29]
8Maternally Expressed Gene (MEG3)Glioma cells, bladder, gastric tissues• Tumor suppressive• Due to down-regulated expression in various tumor conditions including meningioma and glioma, it acts as tumor suppressor[104]
9Taurineupregulated gene 1 (TUG1)Osteosarcoma tissue• Tumor suppressive• Inhibit apoptosis[115]
10GAS5Lung, breast, colorectal, kidney, prostate• Induces apoptosis and suppresses miR-21 expression[92]
11BRAF Activated Noncoding RNA (BANCR)Lung• Tumor suppressive[96]
12H19Lung• Tumor suppressor gene• Higher H19 expression due to demethylation of promoter region results in induction of lung cancer[12, 77]